File:Chaste-An-Open-Source-C++-Library-for-Computational-Physiology-and-Biology-pcbi.1002970.s004.ogv
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English: 3D off-lattice simulation confined to a 2D surface: small intestinal crypts and villus. Left: cells are labelled according to their ancestor cell; each crypt gives rise to a monoclonal population, with a multiclonal villus comprised of cells from each crypt. Right: the same simulation, here with cells labelled according to Delta levels (non-dimensionalised); Delta-Notch patterning occurs due to a signalling model inside each cell, which depends on the activity of neighbouring cells, and is thought to lead to differentiation into secretory and absorbative cell types. The simulation runs from to hours. |
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Source | Video S2 from Mirams G, Arthurs C, Bernabeu M, Bordas R, Cooper J, Corrias A, Davit Y, Dunn S, Fletcher A, Harvey D, Marsh M, Osborne J, Pathmanathan P, Pitt-Francis J, Southern J, Zemzemi N, Gavaghan D (2013). "Chaste: An Open Source C++ Library for Computational Physiology and Biology". PLOS Computational Biology. DOI:10.1371/journal.pcbi.1002970. PMID 23388716. PMC: 3597547. | ||
Author | Mirams G, Arthurs C, Bernabeu M, Bordas R, Cooper J, Corrias A, Davit Y, Dunn S, Fletcher A, Harvey D, Marsh M, Osborne J, Pathmanathan P, Pitt-Francis J, Southern J, Zemzemi N, Gavaghan D | ||
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Category:Biophysical simulations
Category:C++
Category:CC-BY-2.5
Category:Cell motility
Category:Interdisciplinary physics
Category:Media from PLOS Computational Biology
Category:Ogv videos
Category:Pattern formation
Category:Uploaded with Open Access Media Importer
Category:Uploaded with Open Access Media Importer and needing category review
Category:Video display resolution 1036 x 852
Category:Videos from open-access scholarly articles
Category:Videos of bioinformatics
Category:Videos of computer modelling
Category:Videos of developmental biology
Category:Videos of finite element analysis
Category:Videos of numerical analysis
Category:Videos of systems biology
Category:Videos of theoretical biology