File:Chaste-An-Open-Source-C++-Library-for-Computational-Physiology-and-Biology-pcbi.1002970.s003.ogv

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English: 3D off-lattice simulation coupled to PDE: 3D simulation of a tumour spheroid. A cross-section of a tumour spheroid is presented. Cell centres, nodes of a mesh, are represented by spherical shells and coloured according to the local oxygen concentration. Proliferation is dependent on oxygen, which diffuses and is taken up by cells in the spheroid, such that only cells near the outer rim divide. Cell death occurs under low oxygen conditions near the centre of the spheroid. Shown from to hours.
Date
Source Video S1 from Mirams G, Arthurs C, Bernabeu M, Bordas R, Cooper J, Corrias A, Davit Y, Dunn S, Fletcher A, Harvey D, Marsh M, Osborne J, Pathmanathan P, Pitt-Francis J, Southern J, Zemzemi N, Gavaghan D (2013). "Chaste: An Open Source C++ Library for Computational Physiology and Biology". PLOS Computational Biology. DOI:10.1371/journal.pcbi.1002970. PMID 23388716. PMC: 3597547.
Author Mirams G, Arthurs C, Bernabeu M, Bordas R, Cooper J, Corrias A, Davit Y, Dunn S, Fletcher A, Harvey D, Marsh M, Osborne J, Pathmanathan P, Pitt-Francis J, Southern J, Zemzemi N, Gavaghan D
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Category:Videos of bioinformatics Category:Videos of developmental biology Category:Pattern formation Category:Videos of systems biology Category:Videos of theoretical biology Category:C++ Category:Videos of computer modelling Category:Videos of numerical analysis Category:Videos of finite element analysis Category:Biophysical simulations Category:Cell motility Category:Interdisciplinary physics Category:Media from PLOS Computational Biology Category:Uploaded with Open Access Media Importer Category:Videos from open-access scholarly articles Category:Uploaded with Open Access Media Importer and needing category review Category:Ogv videos Category:Video display resolution 1348 x 772
Category:Biophysical simulations Category:C++ Category:CC-BY-2.5 Category:Cell motility Category:Interdisciplinary physics Category:Media from PLOS Computational Biology Category:Ogv videos Category:Pattern formation Category:Uploaded with Open Access Media Importer Category:Uploaded with Open Access Media Importer and needing category review Category:Video display resolution 1348 x 772 Category:Videos from open-access scholarly articles Category:Videos of bioinformatics Category:Videos of computer modelling Category:Videos of developmental biology Category:Videos of finite element analysis Category:Videos of numerical analysis Category:Videos of systems biology Category:Videos of theoretical biology