File:GUIdock-Using-Docker-Containers-with-a-Common-Graphics-User-Interface-to-Address-the-pone.0152686.s002.ogv

Summary

Description
English: Demonstration of GUIdock on Linux, Mac OS and Windows. In this video, we ran GUIdock on the same sample dataset across Linux, Mac OS and Windows. We demonstrate that identical gene networks were derived in each operating system. We chose a 9-gene subset of the human cancer RNAseq data from Klijn et al. [41]. Among these 9 genes, (CDKN2A, CDKN2B, CCNE1, CCND1) belong to the cell cycle pathway and (ZRSR2, U2AF1, U2AF2, SRSF2, SF3A1) belong to the splicing pathway as indicated in Supplementary Table 12 in Klijn et al. [41]. This video is also available on YouTube at https://www.youtube.com/watch?v=k1WkIx0EENo.
Date
Source S1 Video from Hung L, Kristiyanto D, Lee S, Yeung K (2016). "GUIdock: Using Docker Containers with a Common Graphics User Interface to Address the Reproducibility of Research". PLOS ONE. DOI:10.1371/journal.pone.0152686. PMID 27045593. PMC: 4821530.
Author Hung L, Kristiyanto D, Lee S, Yeung K
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Category:Ergonomics Category:Videos of graphical user interface Category:Videos of computer design Category:Videos of bioinformatics Category:Gene regulatory networks Category:Operating systems Category:Gene expression Category:Media from PLOS ONE Category:Uploaded with Open Access Media Importer Category:Uploaded with Open Access Media Importer and needing category review Category:Videos from open-access scholarly articles Category:Docker (virtualization software) Category:Video display resolution 854 x 480 Category:Ogv videos
Category:CC-BY-4.0 Category:Docker (virtualization software) Category:Ergonomics Category:Gene expression Category:Gene regulatory networks Category:Media from PLOS ONE Category:Ogv videos Category:Operating systems Category:Uploaded with Open Access Media Importer Category:Uploaded with Open Access Media Importer and needing category review Category:Video display resolution 854 x 480 Category:Videos from open-access scholarly articles Category:Videos of bioinformatics Category:Videos of computer design Category:Videos of graphical user interface